Package org.broad.igv.bbfile

Class BBTotalSummaryBlock

java.lang.Object

org.broad.igv.bbfile.BBTotalSummaryBlock

public class BBTotalSummaryBlock
extends java.lang.Object

Created by IntelliJ IDEA. User: martind Date: Jan 18, 2010 Time: 12:51:25 PM To change this template use File | Settings | File Templates.

Field Summary

Fields

Modifier and Type	Field	Description
static int	TOTAL_SUMMARY_BLOCK_SIZE

Constructor Summary

Constructors

Constructor	Description
BBTotalSummaryBlock(long basesCovered, float minVal, float maxVal, float sumData, float sumSquares)
BBTotalSummaryBlock(SeekableStream fis, long fileOffset, boolean isLowToHigh)

Method Summary

Modifier and Type	Method	Description
long	getBasesCovered()
float	getMaxVal()
SeekableStream	getMBBFis()
float	getMinVal()
float	getSumData()
long	getSummaryBlockOffset()
static int	getSummaryBlockSize()
float	getSumSquares()
void	printTotalSummaryBlock()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

TOTAL_SUMMARY_BLOCK_SIZE

public static final int TOTAL_SUMMARY_BLOCK_SIZE

See Also:

Constant Field Values

Constructor Detail

BBTotalSummaryBlock

public BBTotalSummaryBlock(SeekableStream fis,
                           long fileOffset,
                           boolean isLowToHigh)

BBTotalSummaryBlock

public BBTotalSummaryBlock(long basesCovered,
                           float minVal,
                           float maxVal,
                           float sumData,
                           float sumSquares)

Method Detail

getSummaryBlockSize

public static int getSummaryBlockSize()

getMBBFis

public SeekableStream getMBBFis()

getSummaryBlockOffset

public long getSummaryBlockOffset()

getBasesCovered

public long getBasesCovered()

getMinVal

public float getMinVal()

getMaxVal

public float getMaxVal()

getSumData

public float getSumData()

getSumSquares

public float getSumSquares()

printTotalSummaryBlock

public void printTotalSummaryBlock()