uint.hpp File Reference

Provides alphabet adaptations for standard uint types. More...

#include <limits>
#include <seqan3/core/detail/int_types.hpp>
#include <seqan3/std/concepts>

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Namespaces
	seqan3::custom
	A namespace for third party and standard library specialisations of SeqAn customisation points.

Functions
Free function wrappers for the uint alphabet adaptation
For uint8_t, uint16_t and uint32_t do conversion to/from char types.
template<typename uint_type >
constexpr auto	seqan3::custom::alphabet_size (uint_type const &intgr) noexcept
	Return the number of values the uint type can take. More...
template<typename uint_type >
constexpr auto	seqan3::custom::to_char (uint_type const intgr) noexcept
	Converting uint to char casts to a character type of same size. More...
template<typename uint_type >
constexpr uint_type	seqan3::custom::to_rank (uint_type const intgr) noexcept
	Converting uint to rank is a no-op (it will just return the value you pass in). More...
template<typename uint_type >
constexpr uint_type &	seqan3::custom::assign_char_to (decltype(to_char(uint_type{})) const chr, uint_type &intgr) noexcept
	Assign from a character type via implicit or explicit cast. More...
template<typename uint_type >
constexpr uint_type &	seqan3::custom::assign_rank_to (uint_type const intgr2, uint_type &intgr) noexcept
	Assign a rank to to the uint (same as calling =). More...

Detailed Description

Provides alphabet adaptations for standard uint types.

Author

Hannes Hauswedell <hannes.hauswedell AT fu-berlin.de>

This file provides function and type trait overloads so that the following types fulfil the seqan3::Alphabet:

• uint8_t
• uint16_t
• uint32_t

You will likely not use these interfaces directly, they are, however, very helpful for conversions between other alphabets and between other alphabets and characters.

Attention

Note that uint64_t is absent from the list, because there is no corresponding character type.