| File in seqan3/alignment | Includes file in seqan3/alphabet |
|---|---|
| aligned_sequence / aligned_sequence_concept.hpp | gap / all.hpp |
| matrix / alignment_trace_algorithms.hpp | gap / gapped.hpp |
| pairwise / align_result_selector.hpp | gap / gapped.hpp |
| scoring / aminoacid_scoring_scheme.hpp | aminoacid / aa27.hpp |
| scoring / nucleotide_scoring_scheme.hpp | nucleotide / dna15.hpp |
| scoring / scoring_scheme_base.hpp | concept.hpp |
| scoring / scoring_scheme_concept.hpp | concept.hpp |