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SeqAn3
The Modern C++ library for sequence analysis.
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SeqAn3
The Modern C++ library for sequence analysis.
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Provides files and formats for handling structure data. More...
Collaboration diagram for Structure File:Classes | |
| struct | seqan3::format_vienna |
| The Vienna format (dot bracket notation) for RNA sequences with secondary structure. More... | |
| class | seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ > |
| A class for reading structured sequence files, e.g. Stockholm, Connect, Vienna, ViennaRNA bpp matrix ... More... | |
| struct | seqan3::structure_file_input_default_traits_aa |
| A traits type that specifies input as amino acids. More... | |
| struct | seqan3::structure_file_input_default_traits_rna |
| The default traits for seqan3::structure_file_input. More... | |
| struct | seqan3::structure_file_input_options< seq_legal_alphabet, structured_seq_combined > |
| The options type defines various option members that influence the behaviour of all or some formats. More... | |
| class | seqan3::structure_file_output< selected_field_ids_, valid_formats_, stream_char_type_ > |
| A class for writing structured sequence files, e.g. Stockholm, Connect, Vienna, ViennaRNA bpp matrix ... More... | |
| struct | seqan3::structure_file_output_options |
| The options type defines various option members that influence the behaviour of all or some formats. More... | |
| interface | seqan3::StructureFileInputFormat |
| The generic concept for structure file in formats. More... | |
| interface | seqan3::StructureFileInputTraits |
| The requirements a traits_type for seqan3::structure_file_input must meet. More... | |
| interface | seqan3::StructureFileOutputFormat |
| The generic concept for structure file out formats. More... | |
| struct | std::tuple_element< elem_no, seqan3::structure_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > |
| Obtains the type of the specified element. More... | |
| struct | std::tuple_size< seqan3::structure_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > |
| Provides access to the number of elements in a tuple as a compile-time constant expression. More... | |
Provides files and formats for handling structure data.
1.8.13