pappsomspp
Library for mass spectrometry
pappso::TimsData Member List
This is the complete list of members for
pappso::TimsData
, including all inherited members.
getMassSpectrumCstSPtr
(std::size_t timsId, std::size_t scanNum)
pappso::TimsData
getMassSpectrumCstSPtrByRawIndex
(std::size_t raw_index)
pappso::TimsData
getMsLevelBySpectrumIndex
(std::size_t spectrum_index)
pappso::TimsData
getQualifiedMassSpectrumByRawIndex
(std::size_t spectrum_index, bool want_binary_data)
pappso::TimsData
getQualifiedMs1MassSpectrumByPrecursorId
(std::size_t ms2_index, std::size_t precursor_index, bool want_binary_data)
pappso::TimsData
getQualifiedMs2MassSpectrumByPrecursorId
(QualifiedMassSpectrum &mass_spectrum, std::size_t ms2_index, std::size_t precursor_index, bool want_binary_data)
pappso::TimsData
getRawIndexFromCoordinate
(std::size_t frame_id, std::size_t scan_num) const
pappso::TimsData
private
getScanCoordinateFromRawIndex
(std::size_t spectrum_index) const
pappso::TimsData
private
getTimsFrameBaseCstSPtr
(std::size_t timsId) const
pappso::TimsData
private
getTimsFrameBaseCstSPtrCached
(std::size_t timsId)
pappso::TimsData
private
getTimsFrameCstSPtr
(std::size_t timsId) const
pappso::TimsData
getTimsFrameCstSPtrCached
(std::size_t timsId)
pappso::TimsData
private
getTimsMS1FrameIdRange
(double rt_begin, double rt_end) const
pappso::TimsData
getTotalNumberOfPrecursors
() const
pappso::TimsData
getTotalNumberOfScans
() const
pappso::TimsData
m_cacheSize
pappso::TimsData
private
m_mutex
pappso::TimsData
private
m_timsDataDirectory
pappso::TimsData
private
m_timsFrameBaseCache
pappso::TimsData
private
m_timsFrameCache
pappso::TimsData
private
m_totalNumberOfPrecursors
pappso::TimsData
private
m_totalNumberOfScans
pappso::TimsData
private
mcsp_ms1Filter
pappso::TimsData
private
mcsp_ms2Filter
pappso::TimsData
private
mpa_timsBinDec
pappso::TimsData
private
openDatabaseConnection
() const
pappso::TimsData
private
setMs1FilterCstSPtr
(pappso::FilterInterfaceCstSPtr &filter)
pappso::TimsData
setMs2FilterCstSPtr
(pappso::FilterInterfaceCstSPtr &filter)
pappso::TimsData
TimsData
(QDir timsDataDirectory)
pappso::TimsData
TimsData
(const TimsData &other)
pappso::TimsData
~TimsData
()
pappso::TimsData
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